Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 protein | ECHVI_RS13050 | Not Available | + | 3177904 - 3180624 | 100701.0 |
| 7tm-dism domain-containing protein | ECHVI_RS13055 | Not Available | - | 3180910 - 3182814 | 74709.8 |
| endo-1,4-beta-xylanase | ECHVI_RS13060 | Not Available | + | 3183304 - 3184443 | 43927.2 |
| glycoside hydrolase family 43 protein | ECHVI_RS13065 | Not Available | + | 3184507 - 3185667 | 43153.6 |
| glycosyl hydrolase 115 family protein | ECHVI_RS13070 | Not Available | + | 3186446 - 3189322 | 109596.0 |
| sialate o-acetylesterase | ECHVI_RS13075 | Not Available | + | 3189377 - 3191299 | 72478.8 |
| dihydrofolate reductase family protein | ECHVI_RS13085 | Not Available | + | 3191564 - 3192100 | 19829.9 |
| hypothetical protein | ECHVI_RS23680 | Not Available | + | 3192097 - 3192261 | 5784.35 |
| protocatechuate 3,4-dioxygenase subunit beta | ECHVI_RS13095 | Not Available | - | 3192305 - 3193027 | 26369.5 |
| duf2141 domain-containing protein | ECHVI_RS13100 | Not Available | - | 3193199 - 3193627 | 15566.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.