Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | ECHVI_RS12950 | Not Available | + | 3143376 - 3144029 | 25709.5 |
| fecr family protein | ECHVI_RS12955 | Not Available | + | 3144049 - 3145074 | 39545.3 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS12960 | Not Available | + | 3145217 - 3148663 | 128572.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS12965 | Not Available | + | 3148677 - 3150575 | 72447.7 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS12970 | Not Available | + | 3150616 - 3153636 | 112507.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS12975 | Not Available | + | 3153654 - 3155429 | 65373.8 |
| duf5627 domain-containing protein | ECHVI_RS12980 | Not Available | + | 3155484 - 3156509 | 38115.7 |
| endo-1,4-beta-xylanase | ECHVI_RS12985 | Not Available | + | 3156654 - 3158792 | 78299.3 |
| endo-1,4-beta-xylanase | ECHVI_RS12990 | Not Available | + | 3159064 - 3160218 | 43877.9 |
| glycoside hydrolase 43 family protein | ECHVI_RS12995 | Not Available | + | 3160645 - 3162174 | 57080.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.