Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ECHVI_RS12890 | Not Available | - | 3133175 - 3133744 | 22977.6 |
| hypothetical protein | ECHVI_RS23925 | Not Available | - | 3133843 - 3134610 | 29121.5 |
| hypothetical protein | ECHVI_RS12905 | Not Available | - | 3134600 - 3134938 | 12498.4 |
| helix-turn-helix domain-containing protein | ECHVI_RS12910 | Not Available | - | 3135229 - 3135501 | 10540.3 |
| helix-turn-helix domain-containing protein | ECHVI_RS12915 | Not Available | - | 3135508 - 3135927 | 16359.7 |
| helix-turn-helix domain-containing protein | ECHVI_RS12920 | Not Available | + | 3136119 - 3136526 | 15531.8 |
| hypothetical protein | ECHVI_RS12925 | Not Available | + | 3136523 - 3136849 | 12488.4 |
| hypothetical protein | ECHVI_RS12930 | Not Available | - | 3137569 - 3139011 | 54525.9 |
| upf0489 family protein | ECHVI_RS12935 | Not Available | - | 3139368 - 3140018 | 25310.8 |
| site-specific integrase | ECHVI_RS12940 | Not Available | - | 3140171 - 3141427 | 49521.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.