Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ECHVI_RS12045 | Not Available | + | 2929829 - 2930320 | 19152.8 |
| hypothetical protein | ECHVI_RS23665 | Not Available | + | 2930830 - 2930997 | 6211.65 |
| efflux transporter outer membrane subunit | ECHVI_RS12055 | Not Available | - | 2931085 - 2932545 | 55095.9 |
| efflux rnd transporter permease subunit | ECHVI_RS12060 | Not Available | - | 2932548 - 2935724 | 117220.0 |
| efflux rnd transporter periplasmic adaptor subunit | ECHVI_RS12065 | Not Available | - | 2935870 - 2937015 | 42622.1 |
| diaminopimelate decarboxylase | ECHVI_RS12070 | Not Available | + | 2937424 - 2938812 | 53913.0 |
| alanine racemase | ECHVI_RS12075 | Not Available | - | 2939026 - 2940144 | 41259.6 |
| alpha/beta hydrolase | ECHVI_RS12080 | Not Available | - | 2940149 - 2941189 | 38459.9 |
| hypothetical protein | ECHVI_RS12085 | Not Available | + | 2941568 - 2942107 | 20486.5 |
| hypothetical protein | ECHVI_RS12090 | Not Available | + | 2942139 - 2942636 | 18397.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.