Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytr/algr family response regulator transcription factor | ECHVI_RS10535 | Not Available | - | 2562451 - 2563191 | 27863.6 |
| pas domain-containing sensor histidine kinase | ECHVI_RS10540 | Not Available | + | 2563668 - 2565374 | 64590.3 |
| duf1080 domain-containing protein | ECHVI_RS10545 | Not Available | + | 2565474 - 2566355 | 32662.4 |
| hypothetical protein | ECHVI_RS10550 | Not Available | - | 2566455 - 2566712 | 9805.2 |
| duf2264 domain-containing protein | ECHVI_RS10555 | Not Available | - | 2566905 - 2568155 | 46312.2 |
| beta-n-acetylhexosaminidase | ECHVI_RS10560 | Not Available | - | 2568231 - 2569814 | 60344.7 |
| glycoside hydrolase family 88 protein | ECHVI_RS10565 | Not Available | - | 2569994 - 2571223 | 46235.9 |
| rna polymerase sigma factor | ECHVI_RS10570 | Not Available | + | 2571579 - 2572181 | 23630.8 |
| fecr family protein | ECHVI_RS22970 | Not Available | + | 2572913 - 2573956 | 39832.7 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS10580 | Not Available | + | 2574012 - 2577461 | 127970.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.