Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna guanosine(34) transglycosylase tgt | ECHVI_RS10020 | Not Available | + | 2418237 - 2419367 | 42265.0 |
| lptf/lptg family permease | ECHVI_RS10025 | Not Available | + | 2419367 - 2420440 | 40632.9 |
| dmt family transporter | ECHVI_RS10030 | Not Available | + | 2420445 - 2421365 | 34414.8 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | ECHVI_RS10035 | Not Available | - | 2421397 - 2422203 | 29717.7 |
| dihydroxy-acid dehydratase | ECHVI_RS10045 | Not Available | + | 2422868 - 2424550 | 59860.1 |
| biosynthetic-type acetolactate synthase large subunit | ECHVI_RS10050 | Not Available | + | 2424693 - 2426387 | 61661.4 |
| acetolactate synthase small subunit | ECHVI_RS10055 | Not Available | + | 2426501 - 2427004 | 19149.2 |
| ketol-acid reductoisomerase | ECHVI_RS10060 | Not Available | + | 2427016 - 2428059 | 38522.7 |
| 3-isopropylmalate dehydratase large subunit | ECHVI_RS10065 | Not Available | + | 2428223 - 2429620 | 50814.8 |
| 3-isopropylmalate dehydratase small subunit | ECHVI_RS10070 | Not Available | + | 2429640 - 2430233 | 22342.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.