Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase family protein | ECHVI_RS09045 | Not Available | + | 2161912 - 2162775 | 32254.7 |
| gmc oxidoreductase | ECHVI_RS09050 | Not Available | + | 2162810 - 2164489 | 62654.4 |
| gluconate 2-dehydrogenase subunit 3 family protein | ECHVI_RS09055 | Not Available | + | 2164508 - 2165059 | 20316.3 |
| sugar phosphate isomerase/epimerase family protein | ECHVI_RS09060 | Not Available | + | 2165127 - 2166035 | 33868.9 |
| sh3 domain-containing protein | ECHVI_RS09065 | Not Available | - | 2166535 - 2167113 | 21652.4 |
| family 16 glycosylhydrolase | ECHVI_RS09090 | Not Available | - | 2169381 - 2170253 | 32745.4 |
| glycoside hydrolase family 5 protein | ECHVI_RS09095 | Not Available | - | 2170267 - 2171625 | 52435.2 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS09100 | Not Available | - | 2171689 - 2173212 | 55809.6 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS09105 | Not Available | - | 2173233 - 2176343 | 113202.0 |
| is982 family transposase | ECHVI_RS09110 | Not Available | + | 2176779 - 2177675 | 34683.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.