Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome small subunit-dependent gtpase a | ECHVI_RS08995 | Not Available | + | 2150355 - 2151284 | 35075.1 |
| phosphoribosyltransferase family protein | ECHVI_RS09000 | Not Available | + | 2151449 - 2151952 | 18576.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | ECHVI_RS09005 | Not Available | + | 2152007 - 2152828 | 29545.9 |
| 6-bladed beta-propeller | ECHVI_RS09010 | Not Available | - | 2152932 - 2154020 | 42237.6 |
| nadp-dependent isocitrate dehydrogenase | ECHVI_RS09015 | Not Available | + | 2154343 - 2156586 | 81453.1 |
| duf1080 domain-containing protein | ECHVI_RS09020 | Not Available | - | 2156708 - 2157466 | 28276.8 |
| c-type cytochrome | ECHVI_RS09025 | Not Available | - | 2157520 - 2157945 | 15169.0 |
| sugar phosphate isomerase/epimerase family protein | ECHVI_RS09030 | Not Available | - | 2157973 - 2159025 | 39312.5 |
| gfo/idh/moca family protein | ECHVI_RS09035 | Not Available | - | 2159213 - 2160382 | 43062.3 |
| nucleoside permease | ECHVI_RS09040 | Not Available | + | 2160667 - 2161899 | 45453.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.