Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS08200 | Not Available | + | 1955378 - 1958392 | 108147.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS08205 | Not Available | + | 1958473 - 1959969 | 56261.1 |
| right-handed parallel beta-helix repeat-containing protein | ECHVI_RS08210 | Not Available | + | 1960242 - 1962122 | 70164.5 |
| tim-barrel domain-containing protein | ECHVI_RS08215 | Not Available | + | 1962282 - 1964552 | 85954.3 |
| gfo/idh/moca family protein | ECHVI_RS08220 | Not Available | + | 1964625 - 1965722 | 41468.5 |
| phytanoyl-coa dioxygenase family protein | ECHVI_RS08225 | Not Available | + | 1965817 - 1966569 | 28826.3 |
| sodium:solute symporter | ECHVI_RS08230 | Not Available | + | 1966732 - 1968318 | 58202.8 |
| family 78 glycoside hydrolase catalytic domain | ECHVI_RS08235 | Not Available | + | 1968601 - 1970796 | 84129.5 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | ECHVI_RS08240 | Not Available | + | 1971124 - 1973976 | 107435.0 |
| hypothetical protein | ECHVI_RS08245 | Not Available | + | 1974100 - 1974972 | 32805.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.