Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-arabinofuranosidase c-terminal domain-containing protein | ECHVI_RS08150 | Not Available | + | 1934255 - 1936231 | 74214.6 |
| sialidase family protein | ECHVI_RS08155 | Not Available | + | 1936556 - 1937695 | 42107.4 |
| sugar phosphate isomerase/epimerase family protein | ECHVI_RS08160 | Not Available | + | 1937803 - 1938723 | 32893.5 |
| hypothetical protein | ECHVI_RS08165 | Not Available | + | 1938915 - 1941662 | 103510.0 |
| malectin domain-containing carbohydrate-binding protein | ECHVI_RS08170 | Not Available | + | 1941824 - 1945357 | 132435.0 |
| beta-galactosidase galb | ECHVI_RS08175 | Not Available | + | 1945457 - 1947886 | 92124.5 |
| hypothetical protein | ECHVI_RS08180 | Not Available | - | 1948377 - 1949018 | 22743.5 |
| helix-turn-helix domain-containing protein | ECHVI_RS08185 | Not Available | - | 1949005 - 1949952 | 36089.3 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS08190 | Not Available | + | 1950145 - 1953195 | 113787.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS08195 | Not Available | + | 1953213 - 1954856 | 62819.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.