Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| clpp family protease | ECHVI_RS08000 | Not Available | + | 1880800 - 1881459 | 24146.1 |
| rhamnogalacturonan acetylesterase | ECHVI_RS08005 | Not Available | - | 1881580 - 1883082 | 55609.9 |
| glycoside hydrolase family 105 protein | ECHVI_RS08010 | Not Available | + | 1883402 - 1884790 | 51479.2 |
| glycoside hydrolase family 5 protein | ECHVI_RS08015 | Not Available | + | 1885038 - 1886009 | 36624.0 |
| is110 family transposase | ECHVI_RS08020 | Not Available | + | 1887363 - 1888421 | 40038.1 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS08025 | Not Available | + | 1888956 - 1892222 | 119355.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS08030 | Not Available | + | 1892243 - 1894111 | 69610.1 |
| hypothetical protein | ECHVI_RS08035 | Not Available | - | 1894171 - 1894569 | 14445.3 |
| glycoside hydrolase family 28 protein | ECHVI_RS08040 | Not Available | + | 1894853 - 1896220 | 51425.7 |
| dienelactone hydrolase family protein | ECHVI_RS08045 | Not Available | - | 1896227 - 1897117 | 32802.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.