Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | ECHVI_RS22925 | Not Available | + | 1718630 - 1721128 | 90094.9 |
| type ix secretion system membrane protein porp/sprf | ECHVI_RS07340 | Not Available | + | 1721142 - 1722119 | 36109.8 |
| ompa family protein | ECHVI_RS07345 | Not Available | + | 1722122 - 1724806 | 100619.0 |
| duf4870 domain-containing protein | ECHVI_RS22930 | Not Available | + | 1725254 - 1725622 | 13972.7 |
| tspo/mbr family protein | ECHVI_RS07355 | Not Available | + | 1725691 - 1726197 | 19293.4 |
| srpbcc family protein | ECHVI_RS07360 | Not Available | + | 1726273 - 1726755 | 18323.3 |
| cryptochrome/photolyase family protein | ECHVI_RS07365 | Not Available | + | 1726757 - 1728241 | 57849.3 |
| trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd | ECHVI_RS07370 | Not Available | - | 1728258 - 1728947 | 26237.3 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | ECHVI_RS07375 | Not Available | - | 1728949 - 1729434 | 17851.5 |
| m16 family metallopeptidase | ECHVI_RS07380 | Not Available | - | 1729501 - 1730742 | 46997.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.