Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phytoene desaturase family protein | ECHVI_RS07235 | Not Available | + | 1692207 - 1693703 | 56239.3 |
| phytoene/squalene synthase family protein | ECHVI_RS07240 | Not Available | + | 1693707 - 1694549 | 32365.5 |
| lycopene cyclase domain-containing protein | ECHVI_RS07245 | Not Available | + | 1694558 - 1695268 | 27462.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | ECHVI_RS07250 | Not Available | + | 1695272 - 1696117 | 31709.9 |
| fatty acid desaturase | ECHVI_RS07255 | Not Available | + | 1696151 - 1696843 | 27448.3 |
| bama/tama family outer membrane protein | ECHVI_RS07260 | Not Available | + | 1696929 - 1698098 | 44159.4 |
| hypothetical protein | ECHVI_RS07265 | Not Available | - | 1698119 - 1699360 | 48331.5 |
| hlyd family secretion protein | ECHVI_RS07270 | Not Available | - | 1699365 - 1700369 | 38004.9 |
| duf4956 domain-containing protein | ECHVI_RS07275 | Not Available | - | 1700372 - 1701064 | 25934.6 |
| coth kinase family protein | ECHVI_RS07280 | Not Available | - | 1701106 - 1704549 | 131850.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.