Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | ECHVI_RS06820 | Not Available | - | 1609536 - 1610264 | 27932.4 |
| sensor histidine kinase | ECHVI_RS06825 | Not Available | - | 1610351 - 1611634 | 49768.2 |
| response regulator transcription factor | ECHVI_RS06830 | Not Available | - | 1611631 - 1612314 | 25987.3 |
| hypothetical protein | ECHVI_RS06835 | Not Available | - | 1612903 - 1613112 | 7848.54 |
| recombinase family protein | ECHVI_RS06840 | Not Available | - | 1613136 - 1614632 | 57495.4 |
| tolc family protein | ECHVI_RS06850 | Not Available | + | 1615255 - 1616439 | 45267.7 |
| hypothetical protein | ECHVI_RS06855 | Not Available | + | 1616461 - 1616721 | 9451.5 |
| efflux rnd transporter periplasmic adaptor subunit | ECHVI_RS06860 | Not Available | + | 1616742 - 1618253 | 54732.6 |
| efflux rnd transporter permease subunit | ECHVI_RS06865 | Not Available | + | 1618266 - 1621346 | 111869.0 |
| hypothetical protein | ECHVI_RS06870 | Not Available | - | 1621849 - 1622052 | 7548.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.