Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | ECHVI_RS06295 | Not Available | - | 1487348 - 1489048 | 64939.2 |
| hypothetical protein | ECHVI_RS06300 | Not Available | + | 1489256 - 1489891 | 24226.6 |
| diaminopimelate decarboxylase | ECHVI_RS06305 | Not Available | + | 1490007 - 1491239 | 45246.7 |
| glutamate--trna ligase | ECHVI_RS06310 | Not Available | + | 1491892 - 1493433 | 58561.2 |
| hypothetical protein | ECHVI_RS06315 | Not Available | + | 1493512 - 1493715 | 7842.27 |
| porin family protein | ECHVI_RS06320 | Not Available | + | 1493787 - 1494470 | 25594.7 |
| duf4221 family protein | ECHVI_RS06325 | Not Available | - | 1494770 - 1495783 | 38426.1 |
| l-glutamate gamma-semialdehyde dehydrogenase | ECHVI_RS06330 | Not Available | - | 1496044 - 1497675 | 60256.6 |
| yjjg family noncanonical pyrimidine nucleotidase | ECHVI_RS06335 | Not Available | - | 1497761 - 1498456 | 27170.2 |
| arsr/smtb family transcription factor | ECHVI_RS06340 | Not Available | - | 1498470 - 1498850 | 15140.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.