Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phage holin family protein | ECHVI_RS05885 | Not Available | + | 1385913 - 1386275 | 13593.2 |
| hypothetical protein | ECHVI_RS05890 | Not Available | + | 1386268 - 1386633 | 13320.5 |
| geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase | ECHVI_RS05895 | Not Available | + | 1386614 - 1387399 | 27575.8 |
| arac family transcriptional regulator | ECHVI_RS05900 | Not Available | - | 1387382 - 1388311 | 35822.4 |
| acyl-coa dehydrogenase | ECHVI_RS05905 | Not Available | - | 1388451 - 1389590 | 41564.8 |
| t9ss type a sorting domain-containing protein | ECHVI_RS05910 | Not Available | - | 1389706 - 1392039 | 85588.0 |
| duf4105 domain-containing protein | ECHVI_RS05915 | Not Available | + | 1392063 - 1393247 | 45840.7 |
| excinuclease abc subunit uvrb | ECHVI_RS05920 | Not Available | + | 1393300 - 1395336 | 77604.6 |
| hypothetical protein | ECHVI_RS05925 | Not Available | + | 1395336 - 1395773 | 16123.6 |
| helix-turn-helix domain-containing protein | ECHVI_RS05930 | Not Available | + | 1395786 - 1396424 | 24579.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.