Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yfit family bacillithiol transferase | ECHVI_RS04965 | Not Available | - | 1187545 - 1188090 | 21206.2 |
| phospholipase d-like domain-containing protein | ECHVI_RS04970 | Not Available | - | 1188305 - 1188991 | 26279.1 |
| very short patch repair endonuclease | ECHVI_RS04975 | Not Available | + | 1189223 - 1189690 | 18687.9 |
| hnh endonuclease | ECHVI_RS04980 | Not Available | - | 1189705 - 1190469 | 29494.3 |
| had family hydrolase | ECHVI_RS04985 | Not Available | + | 1190621 - 1191277 | 24489.1 |
| secondary thiamine-phosphate synthase enzyme yjbq | ECHVI_RS04990 | Not Available | - | 1191357 - 1191779 | 15639.8 |
| dna repair protein rada | ECHVI_RS05000 | Not Available | - | 1192607 - 1193983 | 50433.8 |
| dna polymerase i | ECHVI_RS05005 | Not Available | - | 1194131 - 1196944 | 105812.0 |
| hypothetical protein | ECHVI_RS05010 | Not Available | + | 1197392 - 1197709 | 11740.5 |
| m48 family metallopeptidase | ECHVI_RS05015 | Not Available | - | 1198112 - 1198927 | 30645.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.