Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminomethyl-transferring glycine dehydrogenase | ECHVI_RS03605 | Not Available | - | 832222 - 835122 | 106465.0 |
| m28 family peptidase | ECHVI_RS03610 | Not Available | + | 835483 - 836979 | 56037.6 |
| dead/deah box helicase | ECHVI_RS03615 | Not Available | - | 837478 - 838839 | 51521.4 |
| dihydroorotase | ECHVI_RS03620 | Not Available | + | 838910 - 840259 | 50312.0 |
| amylo-alpha-1,6-glucosidase | ECHVI_RS03630 | Not Available | + | 840788 - 842704 | 72709.6 |
| glycosyltransferase family 4 protein | ECHVI_RS03635 | Not Available | + | 842717 - 844006 | 48453.5 |
| glycoside hydrolase family 57 protein | ECHVI_RS03640 | Not Available | + | 844003 - 845214 | 47302.1 |
| atp-dependent chaperone clpb | ECHVI_RS03645 | Not Available | - | 845299 - 847911 | 97624.4 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | ECHVI_RS03655 | Not Available | + | 849108 - 850166 | 40041.3 |
| outer membrane beta-barrel protein | ECHVI_RS03660 | Not Available | + | 850321 - 850791 | 17394.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.