Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4,5-dopa dioxygenase extradiol | ECHVI_RS19455 | Not Available | - | 4794525 - 4795367 | 31625.9 |
| 2'-5' rna ligase family protein | ECHVI_RS19460 | Not Available | + | 4795564 - 4796256 | 26882.1 |
| endonuclease/exonuclease/phosphatase family protein | ECHVI_RS19465 | Not Available | + | 4796402 - 4797430 | 39421.4 |
| gluconate 5-dehydrogenase | ECHVI_RS19470 | Not Available | - | 4797665 - 4798453 | 28047.9 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | ECHVI_RS19475 | Not Available | - | 4798559 - 4799398 | 31483.4 |
| duf4861 domain-containing protein | ECHVI_RS19485 | Not Available | - | 4799891 - 4801117 | 45507.4 |
| tqo small subunit doxd | ECHVI_RS19490 | Not Available | - | 4801335 - 4802354 | 37451.4 |
| dsre family protein | ECHVI_RS19495 | Not Available | - | 4802366 - 4802782 | 15335.1 |
| hypothetical protein | ECHVI_RS19500 | Not Available | - | 4803060 - 4803434 | 13802.8 |
| chloride channel protein | ECHVI_RS19505 | Not Available | - | 4803525 - 4804793 | 46186.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.