Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS19405 | Not Available | - | 4782206 - 4785577 | 125415.0 |
| fecr family protein | ECHVI_RS19410 | Not Available | - | 4785602 - 4786672 | 41113.6 |
| circularly permuted type 2 atp-grasp protein | ECHVI_RS19415 | Not Available | + | 4786990 - 4788414 | 53564.5 |
| alpha-e domain-containing protein | ECHVI_RS19420 | Not Available | + | 4788425 - 4789402 | 38151.6 |
| proteasome-type protease | ECHVI_RS19425 | Not Available | + | 4789402 - 4790145 | 28062.2 |
| transglutaminase domain-containing protein | ECHVI_RS19430 | Not Available | + | 4790135 - 4790998 | 32679.8 |
| rna polymerase sigma factor | ECHVI_RS19435 | Not Available | - | 4791319 - 4791993 | 26101.7 |
| rna polymerase sigma factor | ECHVI_RS19440 | Not Available | + | 4792270 - 4792497 | 8721.42 |
| endonuclease/exonuclease/phosphatase family protein | ECHVI_RS19445 | Not Available | + | 4792656 - 4793528 | 33362.9 |
| dinb family protein | ECHVI_RS19450 | Not Available | - | 4793773 - 4794276 | 19425.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.