Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | ECHVI_RS19075 | Not Available | + | 4700547 - 4701122 | 22494.4 |
| peptide-methionine (s)-s-oxide reductase msra | ECHVI_RS19080 | Not Available | + | 4701295 - 4701912 | 23173.7 |
| peptide-methionine (r)-s-oxide reductase msrb | ECHVI_RS19085 | Not Available | + | 4702017 - 4702529 | 19128.7 |
| sdr family oxidoreductase | ECHVI_RS19090 | Not Available | - | 4702693 - 4703337 | 22897.7 |
| sdr family nad(p)-dependent oxidoreductase | ECHVI_RS19095 | Not Available | + | 4703628 - 4704386 | 26462.8 |
| tetr/acrr family transcriptional regulator | ECHVI_RS19100 | Not Available | + | 4704482 - 4705063 | 22332.5 |
| alpha-l-fucosidase | ECHVI_RS19105 | Not Available | - | 4705149 - 4706615 | 56681.4 |
| family 20 glycosylhydrolase | ECHVI_RS19110 | Not Available | - | 4706850 - 4707974 | 43030.0 |
| heparan-alpha-glucosaminide n-acetyltransferase domain-containing protein | ECHVI_RS19115 | Not Available | - | 4707983 - 4709221 | 46475.4 |
| sulfatase | ECHVI_RS19120 | Not Available | - | 4709502 - 4711124 | 59908.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.