Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| swt1 family hepn domain-containing protein | ECHVI_RS18980 | Not Available | - | 4666711 - 4667292 | 23029.4 |
| duf5343 domain-containing protein | ECHVI_RS18985 | Not Available | - | 4667285 - 4667917 | 23604.1 |
| hypothetical protein | ECHVI_RS23760 | Not Available | - | 4668013 - 4668429 | 17053.8 |
| tir domain-containing protein | ECHVI_RS23765 | Not Available | - | 4668393 - 4668863 | 17708.2 |
| mannose-6-phosphate isomerase | ECHVI_RS18995 | Not Available | - | 4669391 - 4669903 | 19643.2 |
| gh92 family glycosyl hydrolase | ECHVI_RS19000 | Not Available | - | 4669959 - 4672265 | 86811.5 |
| sugar mfs transporter | ECHVI_RS19005 | Not Available | - | 4672657 - 4674066 | 50454.9 |
| rok family protein | ECHVI_RS19010 | Not Available | - | 4674232 - 4675131 | 32332.2 |
| gh92 family glycosyl hydrolase | ECHVI_RS19015 | Not Available | - | 4675164 - 4677425 | 85584.1 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS19020 | Not Available | - | 4678868 - 4680496 | 61493.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.