Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | ECHVI_RS18725 | Not Available | + | 4603169 - 4604503 | 50197.2 |
| merr family transcriptional regulator | ECHVI_RS18730 | Not Available | + | 4604907 - 4605260 | 13816.6 |
| dna-processing protein dpra | ECHVI_RS18735 | Not Available | + | 4605241 - 4606362 | 41006.5 |
| hydroxymethylglutaryl-coa lyase | ECHVI_RS18740 | Not Available | - | 4606428 - 4607273 | 30854.9 |
| yfho family protein | ECHVI_RS18745 | Not Available | + | 4608871 - 4611306 | 89735.5 |
| sam-dependent methyltransferase | ECHVI_RS18750 | Not Available | + | 4611290 - 4612000 | 27253.5 |
| glycosyltransferase | ECHVI_RS18755 | Not Available | + | 4612023 - 4612880 | 32428.3 |
| class i sam-dependent methyltransferase | ECHVI_RS18760 | Not Available | + | 4612931 - 4613647 | 28320.8 |
| lipopolysaccharide biosynthesis protein | ECHVI_RS18765 | Not Available | + | 4613651 - 4615141 | 55002.9 |
| degt/dnrj/eryc1/strs family aminotransferase | ECHVI_RS18770 | Not Available | - | 4615247 - 4616347 | 40021.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.