Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-glucuronic acid decarboxylase family protein | ECHVI_RS18470 | Not Available | - | 4533249 - 4534193 | 35579.0 |
| gumc family protein | ECHVI_RS18475 | Not Available | - | 4534670 - 4537102 | 91272.4 |
| polysaccharide biosynthesis/export family protein | ECHVI_RS18480 | Not Available | - | 4537110 - 4537931 | 30970.5 |
| lytr/algr family response regulator transcription factor | ECHVI_RS18495 | Not Available | + | 4539391 - 4540107 | 27382.9 |
| hypothetical protein | ECHVI_RS23755 | Not Available | - | 4540110 - 4540289 | 6614.82 |
| nad-dependent epimerase | ECHVI_RS18500 | Not Available | - | 4540273 - 4541346 | 39997.9 |
| sugar transferase | ECHVI_RS18505 | Not Available | - | 4541562 - 4542278 | 27582.8 |
| capsule assembly wzi family protein | ECHVI_RS18510 | Not Available | - | 4542561 - 4544288 | 64955.2 |
| nad(p)/fad-dependent oxidoreductase | ECHVI_RS18515 | Not Available | + | 4544615 - 4545502 | 31819.9 |
| type ia dna topoisomerase | ECHVI_RS18520 | Not Available | + | 4545802 - 4548144 | 88144.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.