Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ECHVI_RS18220 | Not Available | - | 4461861 - 4462280 | 16247.0 |
| l-glyceraldehyde 3-phosphate reductase | ECHVI_RS18225 | Not Available | + | 4462653 - 4463642 | 36790.9 |
| glycoside hydrolase family 9 protein | ECHVI_RS18230 | Not Available | - | 4463717 - 4465474 | 64103.6 |
| vcbs repeat-containing protein | ECHVI_RS18235 | Not Available | - | 4465487 - 4468810 | 122712.0 |
| glycan-binding surface protein | ECHVI_RS18240 | Not Available | - | 4469223 - 4470497 | 46105.1 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS18245 | Not Available | - | 4470543 - 4472207 | 62767.0 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS18250 | Not Available | - | 4472228 - 4475386 | 115652.0 |
| hybrid sensor histidine kinase/response regulator transcription factor | ECHVI_RS18255 | Not Available | - | 4475946 - 4480076 | 156838.0 |
| tonb-dependent receptor plug domain-containing protein | ECHVI_RS18260 | Not Available | + | 4480635 - 4482542 | 70753.3 |
| duf5522 domain-containing protein | ECHVI_RS24115 | Not Available | + | 4482904 - 4483056 | 5641.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.