Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-quinone oxidoreductase | ECHVI_RS18165 | Not Available | + | 4446962 - 4447954 | 35431.4 |
| amidohydrolase family protein | ECHVI_RS18170 | Not Available | + | 4448320 - 4449726 | 52129.8 |
| o-succinylbenzoate synthase | ECHVI_RS18175 | Not Available | - | 4449747 - 4450844 | 40657.9 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | ECHVI_RS18180 | Not Available | + | 4450953 - 4452176 | 46371.6 |
| lytr/algr family response regulator transcription factor | ECHVI_RS18185 | Not Available | - | 4452173 - 4452589 | 16031.5 |
| efflux rnd transporter permease subunit | ECHVI_RS18190 | Not Available | - | 4452918 - 4456076 | 114147.0 |
| efflux rnd transporter periplasmic adaptor subunit | ECHVI_RS18195 | Not Available | - | 4456118 - 4457224 | 40396.1 |
| tolc family protein | ECHVI_RS18200 | Not Available | - | 4457247 - 4458581 | 50996.5 |
| tetr/acrr family transcriptional regulator | ECHVI_RS18205 | Not Available | - | 4458692 - 4459264 | 22095.6 |
| hypothetical protein | ECHVI_RS23750 | Not Available | + | 4460701 - 4460943 | 8661.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.