Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bile acid:sodium symporter family protein | ECHVI_RS18065 | Not Available | - | 4420056 - 4421051 | 35885.1 |
| trmh family rna methyltransferase | ECHVI_RS18070 | Not Available | - | 4421159 - 4421920 | 27851.3 |
| bama/tama family outer membrane protein | ECHVI_RS18075 | Not Available | + | 4421936 - 4424353 | 93267.4 |
| oxygen-dependent coproporphyrinogen oxidase | ECHVI_RS18080 | Not Available | + | 4424598 - 4425506 | 34525.9 |
| phosphatase pap2 family protein | ECHVI_RS18085 | Not Available | + | 4425511 - 4426098 | 22445.8 |
| riboflavin synthase | ECHVI_RS18090 | Not Available | - | 4426348 - 4426935 | 21557.6 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | ECHVI_RS18095 | Not Available | + | 4427070 - 4427723 | 24159.6 |
| acyl-coa thioesterase | ECHVI_RS18100 | Not Available | + | 4427864 - 4428406 | 20087.4 |
| hypothetical protein | ECHVI_RS18105 | Not Available | + | 4428585 - 4429148 | 21030.0 |
| duf3817 domain-containing protein | ECHVI_RS18110 | Not Available | + | 4429155 - 4429478 | 12744.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.