Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | ECHVI_RS17645 | Not Available | - | 4307257 - 4308552 | 45082.6 |
| trap transporter small permease | ECHVI_RS17650 | Not Available | - | 4308555 - 4309049 | 18370.1 |
| trap transporter substrate-binding protein | ECHVI_RS17655 | Not Available | - | 4309042 - 4310049 | 38169.7 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | ECHVI_RS17660 | Not Available | - | 4310053 - 4310721 | 24379.5 |
| sugar kinase | ECHVI_RS17665 | Not Available | - | 4310740 - 4311735 | 36462.1 |
| uxaa family hydrolase | ECHVI_RS17670 | Not Available | + | 4312110 - 4313756 | 59120.7 |
| duf1080 domain-containing protein | ECHVI_RS17675 | Not Available | + | 4314134 - 4315519 | 51741.4 |
| gfo/idh/moca family protein | ECHVI_RS17680 | Not Available | + | 4315646 - 4316995 | 50180.7 |
| gfo/idh/moca family protein | ECHVI_RS17685 | Not Available | - | 4317592 - 4318911 | 48643.7 |
| formylglycine-generating enzyme family protein | ECHVI_RS17690 | Not Available | - | 4318937 - 4319926 | 37917.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.