Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| contractile injection system tape measure protein | ECHVI_RS23065 | Not Available | - | 4250634 - 4252298 | 64351.9 |
| pkd domain-containing protein | ECHVI_RS17460 | Not Available | - | 4252295 - 4256593 | 162193.0 |
| hypothetical protein | ECHVI_RS17465 | Not Available | - | 4256605 - 4259460 | 109164.0 |
| baseplate j/gp47 family protein | ECHVI_RS17470 | Not Available | - | 4259448 - 4262750 | 125002.0 |
| gpw/gp25 family protein | ECHVI_RS17475 | Not Available | - | 4262806 - 4263222 | 15792.8 |
| paar domain-containing protein | ECHVI_RS17480 | Not Available | - | 4263228 - 4263518 | 9437.81 |
| type vi secretion system tip protein vgrg | ECHVI_RS17485 | Not Available | - | 4263668 - 4265416 | 63224.4 |
| cis tube protein | ECHVI_RS17490 | Not Available | - | 4265413 - 4266102 | 26542.6 |
| duf5908 family protein | ECHVI_RS23885 | Not Available | - | 4266106 - 4266261 | 5561.66 |
| phage tail protein | ECHVI_RS17495 | Not Available | - | 4266261 - 4266704 | 17041.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.