Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS17040 | Not Available | + | 4149937 - 4151535 | 58956.3 |
| hypothetical protein | ECHVI_RS17045 | Not Available | + | 4151842 - 4153623 | 67322.0 |
| duf4861 domain-containing protein | ECHVI_RS17050 | Not Available | + | 4153620 - 4154918 | 48792.2 |
| tlpa family protein disulfide reductase | ECHVI_RS17055 | Not Available | + | 4154989 - 4156095 | 42502.5 |
| ompa family protein | ECHVI_RS17060 | Not Available | - | 4156308 - 4157432 | 42015.5 |
| thioredoxin family protein | ECHVI_RS17065 | Not Available | + | 4158129 - 4158584 | 17743.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | ECHVI_RS17070 | Not Available | + | 4158855 - 4160237 | 50832.9 |
| tyrosine-type recombinase/integrase | ECHVI_RS17075 | Not Available | + | 4160405 - 4161547 | 44805.4 |
| hypothetical protein | ECHVI_RS17080 | Not Available | + | 4161551 - 4162408 | 33857.6 |
| helix-turn-helix transcriptional regulator | ECHVI_RS17085 | Not Available | + | 4162506 - 4162784 | 11111.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.