Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | ECHVI_RS16720 | Not Available | + | 4065069 - 4067210 | 78249.2 |
| rna polymerase sigma factor rpod/siga | ECHVI_RS16725 | Not Available | + | 4067294 - 4068157 | 32785.4 |
| thioredoxin-disulfide reductase | ECHVI_RS16730 | Not Available | + | 4068352 - 4069296 | 34014.2 |
| m23 family metallopeptidase | ECHVI_RS16735 | Not Available | + | 4069303 - 4070334 | 39323.0 |
| bacillithiol biosynthesis deacetylase bshb1 | ECHVI_RS16740 | Not Available | + | 4070397 - 4071113 | 26873.7 |
| pyridoxamine 5'-phosphate oxidase | ECHVI_RS16745 | Not Available | - | 4071283 - 4071918 | 24434.0 |
| yqge/algh family protein | ECHVI_RS16750 | Not Available | + | 4072015 - 4072584 | 21629.6 |
| duf349 domain-containing protein | ECHVI_RS16755 | Not Available | + | 4072640 - 4074517 | 74112.4 |
| ompp1/fadl family transporter | ECHVI_RS16775 | Not Available | - | 4076051 - 4077487 | 52994.0 |
| hypothetical protein | ECHVI_RS16780 | Not Available | - | 4077629 - 4078327 | 26768.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.