Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fasciclin domain-containing protein | ECHVI_RS16515 | Not Available | + | 4006918 - 4008519 | 60805.3 |
| fasciclin domain-containing protein | ECHVI_RS16520 | Not Available | + | 4008531 - 4010120 | 60168.5 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS16525 | Not Available | + | 4010138 - 4013227 | 113826.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS16530 | Not Available | + | 4013227 - 4014873 | 63225.4 |
| polysaccharide lyase family 1 protein | ECHVI_RS16535 | Not Available | + | 4015252 - 4016529 | 46355.4 |
| hypothetical protein | ECHVI_RS16540 | Not Available | + | 4016656 - 4018842 | 82711.6 |
| glycoside hydrolase family 105 protein | ECHVI_RS16545 | Not Available | + | 4019155 - 4020339 | 45269.8 |
| glycoside hydrolase family 28 protein | ECHVI_RS16550 | Not Available | + | 4020419 - 4021846 | 53289.8 |
| hypothetical protein | ECHVI_RS16555 | Not Available | - | 4021999 - 4022361 | 13707.0 |
| lamg-like jellyroll fold domain-containing protein | ECHVI_RS23030 | Not Available | + | 4022776 - 4027509 | 174026.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.