Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glsb/yeaq/ymge family stress response membrane protein | ECHVI_RS16415 | Not Available | + | 3978654 - 3978920 | 9330.82 |
| m28 family peptidase | ECHVI_RS16420 | Not Available | - | 3979229 - 3980719 | 54229.2 |
| pseudouridine synthase | ECHVI_RS16425 | Not Available | - | 3980851 - 3981558 | 27528.0 |
| gfo/idh/moca family protein | ECHVI_RS16430 | Not Available | - | 3981629 - 3982777 | 42965.5 |
| methylated-dna--[protein]-cysteine s-methyltransferase | ECHVI_RS16435 | Not Available | - | 3983009 - 3983857 | 31526.7 |
| dinb family protein | ECHVI_RS16440 | Not Available | - | 3984184 - 3984480 | 11430.9 |
| rhodanese-like domain-containing protein | ECHVI_RS16445 | Not Available | - | 3984703 - 3985008 | 11725.7 |
| t9ss type a sorting domain-containing protein | ECHVI_RS16450 | Not Available | - | 3985014 - 3986861 | 68846.7 |
| pasta domain-containing protein | ECHVI_RS16455 | Not Available | - | 3986862 - 3987638 | 28499.4 |
| t9ss-dependent choice-of-anchor j family protein | ECHVI_RS16460 | Not Available | - | 3988238 - 3991288 | 112379.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.