Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase family protein | ECHVI_RS15215 | Not Available | + | 3728796 - 3729644 | 31829.7 |
| hypothetical protein | ECHVI_RS23720 | Not Available | - | 3730065 - 3730235 | 6272.77 |
| crp/fnr family transcriptional regulator | ECHVI_RS15220 | Not Available | + | 3730401 - 3730991 | 23174.9 |
| m20 family metallopeptidase | ECHVI_RS15225 | Not Available | + | 3731216 - 3732385 | 42775.8 |
| glycoside hydrolase family 28 protein | ECHVI_RS15230 | Not Available | - | 3732416 - 3733735 | 49700.4 |
| vwa domain-containing protein | ECHVI_RS15235 | Not Available | - | 3734038 - 3735249 | 44613.4 |
| rna polymerase sigma-70 factor | ECHVI_RS15240 | Not Available | + | 3735589 - 3736164 | 22810.2 |
| fecr family protein | ECHVI_RS23015 | Not Available | + | 3736279 - 3737238 | 35977.8 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS15250 | Not Available | + | 3737349 - 3740555 | 120842.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS15255 | Not Available | + | 3740569 - 3742164 | 61765.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.