Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ECHVI_RS15110 | Not Available | - | 3702953 - 3703222 | 10582.7 |
| mannonate dehydratase | ECHVI_RS15120 | Not Available | - | 3703471 - 3704649 | 44304.0 |
| sdr family oxidoreductase | ECHVI_RS15125 | Not Available | - | 3704711 - 3705526 | 28890.8 |
| glucuronate isomerase | ECHVI_RS15130 | Not Available | - | 3705545 - 3706972 | 55007.1 |
| laci family dna-binding transcriptional regulator | ECHVI_RS15135 | Not Available | + | 3707337 - 3708359 | 38512.5 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS15140 | Not Available | - | 3708632 - 3710308 | 62819.5 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS15145 | Not Available | - | 3710333 - 3713350 | 110469.0 |
| mfs transporter | ECHVI_RS15150 | Not Available | + | 3713607 - 3714932 | 48853.7 |
| hydroxypyruvate isomerase family protein | ECHVI_RS15155 | Not Available | - | 3715044 - 3715979 | 34912.6 |
| helix-turn-helix transcriptional regulator | ECHVI_RS15160 | Not Available | + | 3716513 - 3717475 | 37565.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.