Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 28 protein | ECHVI_RS15010 | Not Available | + | 3674006 - 3675652 | 59699.4 |
| rhamnogalacturonan acetylesterase | ECHVI_RS15015 | Not Available | + | 3675655 - 3676410 | 28674.8 |
| rhamnogalacturonan acetylesterase | ECHVI_RS15020 | Not Available | + | 3676565 - 3677386 | 31119.0 |
| pectinesterase family protein | ECHVI_RS15025 | Not Available | + | 3677399 - 3679294 | 70338.2 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS15030 | Not Available | + | 3679724 - 3683014 | 121598.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS15035 | Not Available | + | 3683029 - 3684837 | 68610.2 |
| duf4957 domain-containing protein | ECHVI_RS15040 | Not Available | + | 3684869 - 3686518 | 61399.1 |
| polysaccharide lyase family 1 protein | ECHVI_RS15045 | Not Available | + | 3686658 - 3688142 | 54439.8 |
| pectinesterase family protein | ECHVI_RS15050 | Not Available | + | 3688153 - 3689226 | 39361.9 |
| voc family protein | ECHVI_RS15055 | Not Available | + | 3689236 - 3689625 | 14432.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.