Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS13885 | Not Available | + | 3409149 - 3412115 | 108037.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS13890 | Not Available | + | 3412135 - 3413724 | 59525.5 |
| suse domain-containing protein | ECHVI_RS13895 | Not Available | + | 3413741 - 3414784 | 37513.1 |
| class ii fructose-bisphosphate aldolase | ECHVI_RS13900 | Not Available | + | 3415163 - 3416224 | 39147.4 |
| alpha-amylase family glycosyl hydrolase | ECHVI_RS13905 | Not Available | + | 3416577 - 3418076 | 57774.0 |
| hypothetical protein | ECHVI_RS13910 | Not Available | + | 3418576 - 3419085 | 19017.3 |
| rna polymerase sigma factor | ECHVI_RS13915 | Not Available | + | 3419374 - 3419919 | 21426.2 |
| fecr family protein | ECHVI_RS13920 | Not Available | + | 3420116 - 3421072 | 36036.0 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS13925 | Not Available | + | 3421309 - 3424761 | 126939.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ECHVI_RS13930 | Not Available | + | 3424792 - 3426261 | 54042.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.