Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | ECHVI_RS13410 | Not Available | + | 3273185 - 3273781 | 22680.1 |
| fecr family protein | ECHVI_RS13415 | Not Available | + | 3274001 - 3274990 | 37028.2 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS13420 | Not Available | + | 3275010 - 3278354 | 123194.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS13425 | Not Available | + | 3278367 - 3279779 | 51861.0 |
| serine hydrolase domain-containing protein | ECHVI_RS13430 | Not Available | + | 3279854 - 3281143 | 48969.8 |
| glutamate racemase | ECHVI_RS13435 | Not Available | + | 3281155 - 3282687 | 57215.4 |
| n-acyl-d-amino-acid deacylase family protein | ECHVI_RS13440 | Not Available | + | 3282677 - 3284239 | 57394.1 |
| hypothetical protein | ECHVI_RS23695 | Not Available | - | 3284848 - 3285018 | 6139.45 |
| glycoside hydrolase family 43 protein | ECHVI_RS13450 | Not Available | + | 3286541 - 3287704 | 43786.9 |
| hybrid sensor histidine kinase/response regulator transcription factor | ECHVI_RS13455 | Not Available | - | 3287870 - 3291925 | 154045.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.