Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oligogalacturonate lyase family protein | ECHVI_RS12730 | Not Available | - | 3096428 - 3097711 | 47571.4 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS12735 | Not Available | - | 3097708 - 3099282 | 58217.5 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS12740 | Not Available | - | 3099327 - 3102392 | 111583.0 |
| hypothetical protein | ECHVI_RS12745 | Not Available | - | 3102733 - 3103809 | 41384.7 |
| gnat family n-acetyltransferase | ECHVI_RS22990 | Not Available | + | 3103967 - 3104932 | 36612.6 |
| hypothetical protein | ECHVI_RS12760 | Not Available | - | 3105323 - 3106075 | 28074.9 |
| tetr/acrr family transcriptional regulator | ECHVI_RS12765 | Not Available | - | 3106147 - 3106737 | 22048.4 |
| redoxin domain-containing protein | ECHVI_RS12770 | Not Available | - | 3106888 - 3108039 | 43929.1 |
| amidohydrolase family protein | ECHVI_RS12775 | Not Available | - | 3108193 - 3109173 | 38026.6 |
| response regulator transcription factor | ECHVI_RS12780 | Not Available | + | 3109862 - 3110557 | 26199.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.