Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ECHVI_RS12575 | Not Available | + | 3060385 - 3061185 | 28566.4 |
| hypothetical protein | ECHVI_RS12580 | Not Available | + | 3061278 - 3061796 | 19201.6 |
| selt/selw/selh family protein | ECHVI_RS12590 | Not Available | + | 3062173 - 3062454 | 10685.8 |
| rna polymerase sigma factor | ECHVI_RS12595 | Not Available | + | 3062589 - 3063131 | 21306.7 |
| fecr family protein | ECHVI_RS12600 | Not Available | + | 3063422 - 3064450 | 38786.9 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS12605 | Not Available | + | 3064579 - 3068109 | 132069.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS12610 | Not Available | + | 3068131 - 3069882 | 67034.5 |
| sb-pde family phosphodiesterase | ECHVI_RS12615 | Not Available | + | 3069998 - 3071164 | 44411.2 |
| endonuclease/exonuclease/phosphatase family protein | ECHVI_RS12620 | Not Available | + | 3071280 - 3071972 | 25217.2 |
| arylsulfatase | ECHVI_RS12625 | Not Available | + | 3072241 - 3074565 | 86288.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.