Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | ECHVI_RS12395 | Not Available | + | 3016103 - 3018370 | 84710.9 |
| duf4249 domain-containing protein | ECHVI_RS12400 | Not Available | + | 3018373 - 3019185 | 30178.6 |
| hypothetical protein | ECHVI_RS12405 | Not Available | + | 3019451 - 3019648 | 7862.27 |
| hypothetical protein | ECHVI_RS12410 | Not Available | + | 3019992 - 3021170 | 46254.7 |
| winged helix-turn-helix transcriptional regulator | ECHVI_RS12415 | Not Available | + | 3021406 - 3021951 | 20585.3 |
| site-specific integrase | ECHVI_RS12420 | Not Available | + | 3022221 - 3023489 | 49034.5 |
| tyrosine-type recombinase/integrase | ECHVI_RS12425 | Not Available | + | 3023482 - 3024465 | 37752.6 |
| site-specific integrase | ECHVI_RS12430 | Not Available | + | 3024452 - 3025465 | 38983.7 |
| is256 family transposase | ECHVI_RS23320 | Not Available | + | 3025580 - 3025741 | 5951.02 |
| s41 family peptidase | ECHVI_RS12435 | Not Available | + | 3025945 - 3028209 | 85506.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.