Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ECHVI_RS10635 | Not Available | - | 2597722 - 2598198 | 18512.2 |
| rna polymerase sigma factor | ECHVI_RS10640 | Not Available | + | 2598614 - 2599261 | 25812.2 |
| fecr family protein | ECHVI_RS10645 | Not Available | + | 2599345 - 2600397 | 39998.1 |
| tonb-dependent receptor | ECHVI_RS10650 | Not Available | + | 2600432 - 2603869 | 127981.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS10655 | Not Available | + | 2603888 - 2605669 | 67533.2 |
| hypothetical protein | ECHVI_RS10660 | Not Available | + | 2605800 - 2607179 | 49732.8 |
| glycoside hydrolase family 2 protein | ECHVI_RS10665 | Not Available | + | 2607262 - 2609376 | 80479.5 |
| alpha-l-fucosidase | ECHVI_RS10670 | Not Available | + | 2609396 - 2610850 | 55732.4 |
| hypothetical protein | ECHVI_RS10675 | Not Available | + | 2611376 - 2611714 | 12354.3 |
| hypothetical protein | ECHVI_RS10680 | Not Available | + | 2611732 - 2612043 | 11298.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.