Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS10480 | Not Available | + | 2533169 - 2534950 | 68207.8 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | ECHVI_RS10485 | Not Available | + | 2535400 - 2538510 | 119004.0 |
| duf3472 domain-containing protein | ECHVI_RS10490 | Not Available | + | 2538522 - 2539850 | 49819.9 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS10500 | Not Available | + | 2540495 - 2543506 | 109872.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS10505 | Not Available | + | 2543526 - 2545160 | 61684.1 |
| group ii intron reverse transcriptase/maturase | ECHVI_RS10510 | Not Available | + | 2545647 - 2547065 | 53700.6 |
| t9ss c-terminal target domain-containing protein | ECHVI_RS10515 | Not Available | + | 2547550 - 2557092 | 332458.0 |
| type ix secretion system membrane protein porp/sprf | ECHVI_RS10520 | Not Available | + | 2557100 - 2558068 | 35532.2 |
| ompa family protein | ECHVI_RS24240 | Not Available | + | 2558078 - 2560057 | 75701.1 |
| t9ss type a sorting domain-containing protein | ECHVI_RS10530 | Not Available | + | 2560099 - 2562432 | 84608.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.