Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-isopropylmalate synthase regulatory domain-containing protein | ECHVI_RS10075 | Not Available | + | 2430338 - 2431879 | 57210.7 |
| 3-isopropylmalate dehydrogenase | ECHVI_RS10080 | Not Available | + | 2432017 - 2433084 | 39020.9 |
| crp/fnr family transcriptional regulator | ECHVI_RS10085 | Not Available | + | 2433189 - 2433776 | 22382.1 |
| sdr family oxidoreductase | ECHVI_RS10090 | Not Available | + | 2433824 - 2434558 | 27322.6 |
| fad-dependent oxidoreductase | ECHVI_RS10095 | Not Available | - | 2434555 - 2435712 | 43151.9 |
| enoyl-acp reductase | ECHVI_RS10100 | Not Available | - | 2436009 - 2436827 | 29878.6 |
| dna repair protein recn | ECHVI_RS10105 | Not Available | - | 2436967 - 2438619 | 61579.6 |
| duf4835 family protein | ECHVI_RS10110 | Not Available | - | 2438771 - 2439670 | 34924.0 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | ECHVI_RS10115 | Not Available | - | 2439726 - 2440925 | 43402.2 |
| dna-directed rna polymerase subunit omega | ECHVI_RS10120 | Not Available | - | 2440932 - 2441252 | 12133.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.