Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spvb/tcac n-terminal domain-containing protein | ECHVI_RS09625 | Not Available | - | 2304519 - 2314811 | 385980.0 |
| t9ss type a sorting domain-containing protein | ECHVI_RS09630 | Not Available | - | 2314825 - 2316630 | 68641.0 |
| plp-dependent aminotransferase family protein | ECHVI_RS09635 | Not Available | - | 2317076 - 2318422 | 52841.2 |
| hypothetical protein | ECHVI_RS23855 | Not Available | + | 2318658 - 2319353 | 27499.8 |
| maue/doxx family redox-associated membrane protein | ECHVI_RS09645 | Not Available | + | 2319501 - 2319944 | 16501.9 |
| duf6520 family protein | ECHVI_RS09650 | Not Available | + | 2319970 - 2320221 | 8562.96 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS09655 | Not Available | - | 2320270 - 2321631 | 52115.9 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS09660 | Not Available | - | 2321642 - 2325247 | 135237.0 |
| fecr family protein | ECHVI_RS09665 | Not Available | - | 2325572 - 2326612 | 40043.2 |
| rna polymerase sigma-70 factor | ECHVI_RS09670 | Not Available | - | 2326703 - 2327302 | 23257.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.