Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ECHVI_RS09170 | Not Available | + | 2199325 - 2199807 | 17616.5 |
| hypothetical protein | ECHVI_RS09175 | Not Available | + | 2199804 - 2200268 | 17735.7 |
| arac family transcriptional regulator | ECHVI_RS09180 | Not Available | - | 2200271 - 2201110 | 32180.0 |
| xylulokinase | ECHVI_RS09185 | Not Available | + | 2201326 - 2202816 | 54052.5 |
| xylose isomerase | ECHVI_RS09190 | Not Available | + | 2202933 - 2204246 | 49271.8 |
| glycoside hydrolase family 43 protein | ECHVI_RS09195 | Not Available | - | 2204467 - 2205591 | 42015.7 |
| l-arabinose isomerase | ECHVI_RS09200 | Not Available | - | 2205746 - 2207248 | 55739.4 |
| sodium:solute symporter family transporter | ECHVI_RS09205 | Not Available | - | 2207279 - 2209153 | 68093.4 |
| nudix hydrolase | ECHVI_RS09210 | Not Available | - | 2209268 - 2209981 | 27873.6 |
| voc family protein | ECHVI_RS09215 | Not Available | - | 2210107 - 2210547 | 17104.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.