Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| triple tyrosine motif-containing protein | ECHVI_RS09115 | Not Available | - | 2177690 - 2180620 | 111647.0 |
| m28 family metallopeptidase | ECHVI_RS09120 | Not Available | + | 2181275 - 2182255 | 36071.1 |
| sdr family nad(p)-dependent oxidoreductase | ECHVI_RS09125 | Not Available | - | 2182309 - 2183049 | 26097.6 |
| alpha-glucuronidase family glycosyl hydrolase | ECHVI_RS09130 | Not Available | - | 2183075 - 2185237 | 82107.0 |
| laci family dna-binding transcriptional regulator | ECHVI_RS09135 | Not Available | - | 2185271 - 2186308 | 38077.5 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS09145 | Not Available | + | 2186936 - 2190040 | 113697.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS09150 | Not Available | + | 2190048 - 2191994 | 71943.6 |
| mannonate dehydratase | ECHVI_RS09155 | Not Available | + | 2192307 - 2193470 | 43157.7 |
| glycosyl hydrolase 115 family protein | ECHVI_RS09160 | Not Available | + | 2193625 - 2196543 | 109230.0 |
| sodium/sugar symporter | ECHVI_RS09165 | Not Available | + | 2197212 - 2198855 | 59099.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.