Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase | ECHVI_RS07950 | Not Available | - | 1863438 - 1866227 | 104502.0 |
| l-rhamnose mutarotase | ECHVI_RS07955 | Not Available | - | 1866320 - 1866634 | 12019.3 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS07960 | Not Available | + | 1867071 - 1870241 | 115977.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS07965 | Not Available | + | 1870260 - 1871774 | 56126.8 |
| glycoside hydrolase family protein | ECHVI_RS07970 | Not Available | + | 1871908 - 1872981 | 41355.6 |
| duf4450 domain-containing protein | ECHVI_RS07975 | Not Available | + | 1872988 - 1876629 | 135023.0 |
| plp-dependent aminotransferase family protein | ECHVI_RS07980 | Not Available | - | 1877110 - 1878534 | 53573.8 |
| branched-chain amino acid aminotransferase | ECHVI_RS07985 | Not Available | + | 1878768 - 1879835 | 39858.8 |
| rna polymerase sigma factor | ECHVI_RS07990 | Not Available | + | 1880007 - 1880546 | 21081.2 |
| hypothetical protein | ECHVI_RS07995 | Not Available | + | 1880527 - 1880796 | 10957.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.