Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mrec | ECHVI_RS07185 | Not Available | - | 1681052 - 1681885 | 30647.4 |
| rod shape-determining protein | ECHVI_RS07190 | Not Available | - | 1681893 - 1682921 | 37288.6 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | ECHVI_RS07195 | Not Available | - | 1683404 - 1684930 | 55624.1 |
| phosphoribosylglycinamide formyltransferase | ECHVI_RS07200 | Not Available | - | 1685002 - 1685559 | 20717.2 |
| geranylgeranylglycerol-phosphate geranylgeranyltransferase | ECHVI_RS07205 | Not Available | - | 1685837 - 1686712 | 33014.6 |
| udp-glucose 4-epimerase gale | ECHVI_RS07210 | Not Available | - | 1686915 - 1687928 | 37082.2 |
| acyl-coa dehydrogenase family protein | ECHVI_RS07215 | Not Available | + | 1688156 - 1689295 | 41357.6 |
| fad:protein fmn transferase | ECHVI_RS07220 | Not Available | + | 1689478 - 1690542 | 39575.1 |
| zip family metal transporter | ECHVI_RS07225 | Not Available | + | 1690545 - 1691276 | 26504.2 |
| rna polymerase sigma factor | ECHVI_RS07230 | Not Available | + | 1691697 - 1692206 | 19976.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.