Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Echinicola vietnamensis DSM 17526
Accession NumberNC_019904.1
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2291 domain-containing protein | ECHVI_RS06245 | Not Available | - | 1471693 - 1472358 | 24621.5 |
| d-ribose abc transporter substrate-binding protein | ECHVI_RS06250 | Not Available | - | 1472513 - 1473463 | 34246.6 |
| transketolase family protein | ECHVI_RS06255 | Not Available | - | 1473525 - 1474484 | 34337.4 |
| transketolase | ECHVI_RS06260 | Not Available | - | 1474481 - 1475323 | 30796.5 |
| l-fucose/l-arabinose isomerase family protein | ECHVI_RS06265 | Not Available | - | 1475426 - 1476817 | 51051.0 |
| ragb/susd family nutrient uptake outer membrane protein | ECHVI_RS06270 | Not Available | - | 1477249 - 1478874 | 60098.1 |
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS06275 | Not Available | - | 1478879 - 1482253 | 125978.0 |
| fecr family protein | ECHVI_RS06280 | Not Available | - | 1482306 - 1483343 | 40052.8 |
| non-ribosomal peptide synthetase | ECHVI_RS06285 | Not Available | + | 1483752 - 1486460 | 100338.0 |
| response regulator transcription factor | ECHVI_RS06290 | Not Available | - | 1486650 - 1487351 | 26764.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.